Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015811741.1_cds_XP_016496836.1_11020
CDS Infomation

[gene=LOC107815730] [db_xref=GeneID:107815730] [protein=probable methyltransferase PMT2] [protein_id=XP_016496836.1] [location=complement(join(24196..24427,25382..25459,26669..27058,27645..27933,28983..29193,29538..30185))] [gbkey=CDS]
Sequence

ATGGCAATAAAAGGAAATCCAGGAGATAACAGAAGCCGAGGCCCGTTGCCAATATTTGTT
GTAGTTGGACTTTGTTGTTTTTTCTATCTTCTAGGAGCATGGCAAAGAAGTGGTTTTGGG
AAGGGAGACAGCATAGCTCTTCAGATGACAAAGAAGGCAGAAGACTGCAGCATCCTCTCC
AATCTAGAATATGAAACTCATCATGGTGATCAAAGCGGTATGGTTGATGATCCCAAGCTA
GAAGTCAAGCAGTTTGAGCCTTGTGGTGAGCAATATGTTGATTACACACCGTGTCATGAT
CAGATGCGAGCAATGACATTTCCTAGAGAAAATATGAACTACAGAGAGAGACATTGTCCT
CCAGAGGAAGAGAAGCTGCATTGTCTTATTCCAGCCCCAAAAGGATATGTGACTCCTTTT
CAATGGCCGAAGAGTCGTGATTACGTACCCTTTGCAAATGCACCACATAAAAGTTTAACA
GTTGAGAAGGCAGTGCAAAACTGGGTCCAATATGAAGGGAATTTATTTAGATTTCCAGGT
GGTGGAACTCAATTCCCACATGGGGCAGATGCATATATTGACCAACTTGCTTCTGTGATC
CCAATGGACAATGGTACAGTTCGAACTGCATTGGATACCGGTTGTGGGGTTGCAAGTTGG
GGTGCATACCTTTTCAAGAAGAACGTTATAGCCATGTCATTTGCACCAAGAGATTCACAT
GAAGCTCAAGTCCAATTTGCTTTGGAAAGAGGTGTGCCAGCAGTTATTGGTGTACTTGGA
ACCATAAAATTGCCATTTCCATCAAGGGCCTTTGATATGGCTCATTGTTCACGATGTTTG
ATTCCATGGGCTGCAAATGGTGGAATCTACATGATGGAAGTGGATCGCGTGCTCAGACCA
GGGGGGTACTGGATACTTTCAGGTCCTCCCATCAACTGGCGGACTAATTATCAATCATGG
CAACGGCCTAAAGAGGAGCTGGAAGAGGAACAAAGAATGATTGAAGAGATAGCTGAATTT
CTCTGCTGGGAAAAGAAATATGAGAAAGGTGAGATAGCAATATGGAGAAAACGAGTAAAC
AATGAGTACTGCAGTGAACGAGATTCTCGTGTAACTCTATGTGAATCCTCGAAGTCAGAA
AATGTCTGGTATAAGAAGATGGAGGCATGTGTAACTCCGTATCCTGAAACAAGGAATTCT
GATGAAGTTGCTGGTGGAGAGCTCAAGCCATTTCCAGAGAGACTTAATGCTATTCCTCCA
AGAATAGCAAGTGGATCTGTTCCTGGAGTCTCTGTCGAGTCATTCCAGGAGGACAACAAG
TTGTGGAAAAAGCATGTGAAAGCTTATAAGAGAGTTAACAAGTTCCTTGACACTGGGAGG
TATCGCAATATACTAGATATGAATGCTGGCCTAGGAAGTTTTGCTGCAGCACTAGAGTCA
CCTAAGCTGTGGGTAATGAATGTTATGCCAACTAAAGCAGAAAGCGACACTCTTGGCGTA
TTATATGAACGAGGCCTGATTGGCATATACCATGACTGGTGTGAAGCCTTCTCTACCTAC
CCTCGGACGTATGACCTTATTCATGCAAATGGAGTTTTCAGCTTATATAAGGACAAATGT
AATGTTGAAGACATTCTACTAGAGATGGACAGGATTCTTAGACCAGAAGGTGCAGTTATA
TTCCGAGATCATGCAGATATTCTTGGCCAAGTAAAACGCATTGCAACTGGTATGAGGTGG
AAGACAAAAATGGTAGATAATGAGGATGGTCCTCTTATTCCAGAAAAGGTATTGTTTGCT
GTCAAAAGATACTGGGTTGTTGGAGATAACAACTCCACCGCCTTATAG

Peptide Sequence

PEP ID

XP_016496836.1
PEP Infomation

PREDICTED: probable methyltransferase PMT2 [Nicotiana tabacum]
Sequence

MAIKGNPGDNRSRGPLPIFVVVGLCCFFYLLGAWQRSGFGKGDSIALQMTKKAEDCSILS
NLEYETHHGDQSGMVDDPKLEVKQFEPCGEQYVDYTPCHDQMRAMTFPRENMNYRERHCP
PEEEKLHCLIPAPKGYVTPFQWPKSRDYVPFANAPHKSLTVEKAVQNWVQYEGNLFRFPG
GGTQFPHGADAYIDQLASVIPMDNGTVRTALDTGCGVASWGAYLFKKNVIAMSFAPRDSH
EAQVQFALERGVPAVIGVLGTIKLPFPSRAFDMAHCSRCLIPWAANGGIYMMEVDRVLRP
GGYWILSGPPINWRTNYQSWQRPKEELEEEQRMIEEIAEFLCWEKKYEKGEIAIWRKRVN
NEYCSERDSRVTLCESSKSENVWYKKMEACVTPYPETRNSDEVAGGELKPFPERLNAIPP
RIASGSVPGVSVESFQEDNKLWKKHVKAYKRVNKFLDTGRYRNILDMNAGLGSFAAALES
PKLWVMNVMPTKAESDTLGVLYERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKDKC
NVEDILLEMDRILRPEGAVIFRDHADILGQVKRIATGMRWKTKMVDNEDGPLIPEKVLFA
VKRYWVVGDNNSTAL

Transcript Sequence

Gene sequence data has not been registered.